ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 1520.00 1.29 4.12 100.0 RNY4-201 misc RNA tongue (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 1318.00 81.46 3.58 89.66 MIR3142HG-201 lncRNA tongue (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 4953.00 77.19 13.44 100.0 SNHG6-204 retained intron tongue (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 19230.00 36.38 52.17 100.0 MIR151A-201 miRNA tongue (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 25954.00 49.10 70.41 82.02 MIR151A-201 miRNA tongue (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 7511.00 98.44 20.38 100.0 DENND3-221 protein coding tongue (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 92.00 0.13 0.25 70.23 WDR74-204 protein coding tongue (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 9.00 0.01 0.02 100.0 WDR74-204 protein coding tongue (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 36.00 0.05 0.10 60.0 WDR74-204 protein coding tongue (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 2070.00 2.92 5.62 82.47 WDR74-204 protein coding tongue (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 24.00 0.03 0.07 40.0 WDR74-204 protein coding tongue (Tissue)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 422.00 0.59 1.14 100.0 WDR74-204 protein coding tongue (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 1005.00 1.42 2.73 100.0 WDR74-204 protein coding tongue (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 130.00 0.18 0.35 100.0 WDR74-204 protein coding tongue (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 8249.00 77.11 22.38 100.0 HSPA8-211 retained intron tongue (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 308.00 10.90 0.84 100.0 SCARNA9-201 lncRNA tongue (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 30481.00 87.26 82.69 100.0 TAF1D-215 retained intron tongue (Tissue)
ENST00000530769.5 ENST00000530769.5_2550_2623_+ 2550–2623 161.00 0.46 0.44 100.0 TAF1D-215 retained intron tongue (Tissue)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 2654.00 20.05 7.20 100.0 HSPA8-215 retained intron tongue (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 7333.00 55.39 19.89 100.0 HSPA8-215 retained intron tongue (Tissue)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 6.00 0.05 0.02 100.0 HSPA8-215 retained intron tongue (Tissue)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 749.00 19.71 2.03 100.0 RPS2-215 retained intron tongue (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 18204.00 85.88 49.38 87.36 ENST00000548801 lncRNA tongue (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 1648.00 15.30 4.47 100.0 ENST00000554988 lncRNA tongue (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 484.00 4.49 1.31 100.0 ENST00000554988 lncRNA tongue (Tissue)