ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 84151.00 94.63 228.28 100.0 SNORD90-201 snoRNA tongue (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 1325.00 1.49 3.59 26.7 SNORD90-201 snoRNA tongue (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 1509.00 1.01 4.09 100.0 SNORD69-201 snoRNA tongue (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 851.00 0.57 2.31 100.0 SNORD69-201 snoRNA tongue (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 138066.00 92.40 374.54 100.0 SNORD69-201 snoRNA tongue (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 1325.00 0.89 3.59 100.0 SNORD69-201 snoRNA tongue (Tissue)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 773.00 41.97 2.10 60.16 SNORD70-201 snoRNA tongue (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 11641.00 72.21 31.58 82.09 B4GALNT2-202 protein coding tongue (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 225.00 1.40 0.61 100.0 B4GALNT2-202 protein coding tongue (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 1103.00 85.50 2.99 100.0 NDE1-202 protein coding tongue (Tissue)
ENST00000401172.1 ENST00000401172.1_46_67_+ 46–67 564.00 92.76 1.53 100.0 MIR208B-201 miRNA tongue (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 6982.00 67.81 18.94 100.0 MIR450B-201 miRNA tongue (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 488.00 51.53 1.32 100.0 MIR887-201 miRNA tongue (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 33095.00 88.41 89.78 100.0 MIR889-201 miRNA tongue (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 1754.00 72.75 4.76 100.0 SNORD111-201 snoRNA tongue (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 2848.00 58.23 7.73 79.0 SNORD88A-201 snoRNA tongue (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 245.00 94.59 0.66 100.0 MIR548K-201 miRNA tongue (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 289.00 58.98 0.78 100.0 MIR320B2-201 miRNA tongue (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 34.00 82.93 0.09 100.0 MIR1271-201 miRNA tongue (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 89.00 0.09 0.24 100.0 SNORD100-201 snoRNA tongue (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 94351.00 94.14 255.95 100.0 SNORD100-201 snoRNA tongue (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 1266.00 1.26 3.43 100.0 SNORD100-201 snoRNA tongue (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 220.00 0.22 0.60 100.0 SNORD100-201 snoRNA tongue (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 1185.00 45.52 3.21 100.0 SNORD111B-201 snoRNA tongue (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 61.00 1.33 0.17 100.0 RNU2-36P-201 snRNA tongue (Tissue)