ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 2189.00 0.39 5.94 71.72 MT-TE-201 Mt tRNA tongue (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 2488.00 0.44 6.75 100.0 MT-TE-201 Mt tRNA tongue (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 422279.00 74.28 1145.54 84.71 MT-TE-201 Mt tRNA tongue (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 2996.00 0.53 8.13 100.0 MT-TE-201 Mt tRNA tongue (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 1.00 33.33 0.00 100.0 MIR196A1-201 miRNA tongue (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 1487.00 7.36 4.03 100.0 MT-RNR1-201 Mt rRNA tongue (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 2402.00 11.89 6.52 100.0 MT-RNR1-201 Mt rRNA tongue (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 3113.00 80.25 8.44 100.0 MIR454-201 miRNA tongue (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 465.00 16.39 1.26 100.0 MIR501-201 miRNA tongue (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 1827.00 88.73 4.96 100.0 MIR769-201 miRNA tongue (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 119.00 60.41 0.32 100.0 KRTAP19-1-201 protein coding tongue (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 1698.00 52.55 4.61 100.0 MIR708-201 miRNA tongue (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 163.00 82.74 0.44 100.0 MIR509-3-201 miRNA tongue (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 9045.00 66.44 24.54 100.0 MIR543-201 miRNA tongue (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 96.00 94.12 0.26 100.0 MIR301B-201 miRNA tongue (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 2701.00 46.87 7.33 71.47 RNU1-82P-201 snRNA tongue (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 5360.00 37.57 14.54 100.0 SNORD66-201 snoRNA tongue (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 440.00 3.08 1.19 100.0 SNORD66-201 snoRNA tongue (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 51.00 0.36 0.14 100.0 SNORD66-201 snoRNA tongue (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 2147.00 15.05 5.82 81.11 SNORD66-201 snoRNA tongue (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 550.00 72.56 1.49 100.0 U3.17-201 snoRNA tongue (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 3832.00 56.26 10.40 100.0 SNORD17-201 snoRNA tongue (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 81.00 37.85 0.22 100.0 SNORD72-201 snoRNA tongue (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 2086.00 73.42 5.66 100.0 SNORD70B-201 snoRNA tongue (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 2693.00 34.53 7.31 77.7 RNY4P18-201 misc RNA tongue (Tissue)