ENCFF001RLU

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 612.00 8.81 2.08 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 159.00 0.35 0.54 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 12.00 0.03 0.04 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 111.00 0.24 0.38 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 158.00 0.35 0.54 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 34704.00 75.94 117.90 88.78 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 513.00 7.72 1.74 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 1413.00 17.12 4.80 43.21 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 87.00 1.45 0.30 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 621.00 17.40 2.11 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 524.00 14.68 1.78 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 406.00 11.38 1.38 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 279.00 0.06 0.95 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 296.00 18.97 1.01 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 1673.00 51.04 5.68 70.12 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 50.00 1.53 0.17 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 713.00 21.75 2.42 29.88 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 393.00 25.54 1.34 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 2.00 0.13 0.01 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 334.00 52.85 1.13 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 302.00 60.52 1.03 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 154.00 30.74 0.52 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 20.00 0.45 0.07 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 17.00 0.39 0.06 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 20.00 0.45 0.07 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA spinal cord (Tissue)