ENCFF001RLU

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 1203.00 0.37 4.09 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 126.00 43.90 0.43 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 196.00 0.04 0.67 97.51 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 346.00 14.59 1.18 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 409.00 17.24 1.39 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 995.00 25.38 3.38 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 40.00 0.60 0.14 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 464.00 0.10 1.58 6.94 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 13.00 0.00 0.04 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 671.00 35.20 2.28 91.04 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 248.00 13.01 0.84 26.99 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 277.00 8.55 0.94 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 1563.00 0.48 5.31 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 237057.00 73.30 805.34 95.06 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 98.00 12.47 0.33 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 86.00 2.27 0.29 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 19.00 0.43 0.06 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 162.00 1.67 0.55 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 207.00 2.13 0.70 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 418.00 4.30 1.42 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 54.00 0.56 0.18 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 443.00 4.56 1.50 99.11 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 104.00 1.07 0.35 40.78 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 843.00 11.66 2.86 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 1312.00 18.15 4.46 32.96 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA spinal cord (Tissue)