ENCFF001RLU

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 6586.65 36.52 22.38 60.39 ENST00000756336 lncRNA spinal cord (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 105.17 0.58 0.36 35.29 ENST00000756336 lncRNA spinal cord (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 610.61 3.39 2.07 43.34 ENST00000756336 lncRNA spinal cord (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 285.00 1.58 0.97 100.0 ENST00000756336 lncRNA spinal cord (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 319.32 1.77 1.08 84.48 ENST00000756336 lncRNA spinal cord (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 3044.00 98.23 10.34 100.0 ENST00000756452 lncRNA spinal cord (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 1334.00 23.37 4.53 100.0 ENST00000760093 lncRNA spinal cord (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 305.00 5.34 1.04 100.0 ENST00000760093 lncRNA spinal cord (Tissue)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 175590.00 83.09 596.52 89.75 SNHG14-356 lncRNA spinal cord (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 2897.00 15.35 9.84 58.56 LINC02806-241 lncRNA spinal cord (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 194.00 1.03 0.66 100.0 LINC02806-241 lncRNA spinal cord (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 9141.00 48.42 31.05 76.37 LINC02806-241 lncRNA spinal cord (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 2016.00 84.25 6.85 100.0 EHBP1-AS1-210 lncRNA spinal cord (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 116.00 16.34 0.39 100.0 ENST00000770398 lncRNA spinal cord (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 187.00 26.34 0.64 100.0 ENST00000770398 lncRNA spinal cord (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 168.00 23.66 0.57 100.0 ENST00000770398 lncRNA spinal cord (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 96.00 0.14 0.33 100.0 ENST00000771298 lncRNA spinal cord (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 23.00 0.03 0.08 100.0 ENST00000771298 lncRNA spinal cord (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 62276.00 91.58 211.57 96.3 ENST00000771298 lncRNA spinal cord (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 106.00 0.16 0.36 100.0 ENST00000771298 lncRNA spinal cord (Tissue)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 4113.00 50.83 13.97 100.0 ENST00000772672 lncRNA spinal cord (Tissue)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 6.00 0.07 0.02 100.0 ENST00000772672 lncRNA spinal cord (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 94.00 1.16 0.32 100.0 ENST00000772672 lncRNA spinal cord (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 4267.00 66.33 14.50 100.0 ENST00000773843 lncRNA spinal cord (Tissue)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 13.00 0.01 0.04 100.0 SNHG12-223 lncRNA spinal cord (Tissue)