ENCFF001RLU

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 622.00 74.67 2.11 100.0 MIR34BHG-202 lncRNA spinal cord (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 37364.00 85.01 126.93 88.58 THBS3-AS1-228 lncRNA spinal cord (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 5.00 45.45 0.02 100.0 MIR200CHG-202 lncRNA spinal cord (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 1.00 9.09 0.00 100.0 MIR200CHG-202 lncRNA spinal cord (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 125.00 1.52 0.42 100.0 SNHG16-266 lncRNA spinal cord (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 1391.00 16.97 4.73 100.0 SNHG16-266 lncRNA spinal cord (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 714.00 8.71 2.43 100.0 SNHG16-266 lncRNA spinal cord (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 511.00 6.23 1.74 100.0 SNHG16-266 lncRNA spinal cord (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 691.00 50.47 2.35 100.0 MEG8-261 lncRNA spinal cord (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 820.00 49.85 2.79 100.0 NR2F2-AS1-327 lncRNA spinal cord (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 45.00 2.76 0.15 33.58 ENST00000747675 lncRNA spinal cord (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 514.00 31.51 1.75 100.0 ENST00000747675 lncRNA spinal cord (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 42.00 2.58 0.14 48.28 ENST00000747675 lncRNA spinal cord (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 47.00 2.88 0.16 51.09 ENST00000747675 lncRNA spinal cord (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 150.00 9.20 0.51 100.0 ENST00000747675 lncRNA spinal cord (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 3669.00 51.10 12.46 95.35 SNHG26-250 lncRNA spinal cord (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 2396.00 33.37 8.14 96.54 SNHG26-250 lncRNA spinal cord (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 37.00 2.25 0.13 100.0 LINC02422-207 lncRNA spinal cord (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 105.00 2.58 0.36 100.0 ENST00000753088 lncRNA spinal cord (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 486.00 11.96 1.65 100.0 ENST00000753088 lncRNA spinal cord (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 1376.37 7.63 4.68 38.75 ENST00000756336 lncRNA spinal cord (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 187.00 1.04 0.64 100.0 ENST00000756336 lncRNA spinal cord (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 51.00 0.28 0.17 100.0 ENST00000756336 lncRNA spinal cord (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 79.00 0.44 0.27 100.0 ENST00000756336 lncRNA spinal cord (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 4269.05 23.67 14.50 45.5 ENST00000756336 lncRNA spinal cord (Tissue)