ENCFF001RLU

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 40842.00 26.63 138.75 95.49 SNHG14-241 lncRNA spinal cord (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 92296.00 96.59 313.55 100.0 MEG8-228 lncRNA spinal cord (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 5224.00 18.55 17.75 100.0 SNHG14-254 lncRNA spinal cord (Tissue)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 7933.00 20.08 26.95 100.0 SNHG14-261 lncRNA spinal cord (Tissue)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 13105.00 33.17 44.52 88.83 SNHG14-261 lncRNA spinal cord (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 18.00 0.43 0.06 100.0 LIMD1-AS1-204 lncRNA spinal cord (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 948.00 22.63 3.22 86.65 LIMD1-AS1-204 lncRNA spinal cord (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 58434.00 76.52 198.51 89.17 MIR99AHG-262 lncRNA spinal cord (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 6399.00 8.38 21.74 100.0 MIR99AHG-262 lncRNA spinal cord (Tissue)
ENST00000660376.1 ENST00000660376.1_1_78_+ 1–78 2455.00 5.77 8.34 100.0 SNHG14-266 lncRNA spinal cord (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 733.00 46.16 2.49 100.0 SNHG14-270 lncRNA spinal cord (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 993.00 0.70 3.37 100.0 SNHG14-275 lncRNA spinal cord (Tissue)
ENST00000661688.1 ENST00000661688.1_965_986_+ 965–986 1630.00 0.84 5.54 100.0 MIR9-2HG-225 lncRNA spinal cord (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 166392.00 85.49 565.27 89.68 MIR9-2HG-225 lncRNA spinal cord (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 812.00 13.57 2.76 100.0 MEG8-233 lncRNA spinal cord (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 2302.00 38.46 7.82 100.0 MEG8-233 lncRNA spinal cord (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 4154.00 23.66 14.11 100.0 SNHG14-278 lncRNA spinal cord (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 353.00 2.01 1.20 85.27 SNHG14-278 lncRNA spinal cord (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 3607.00 52.45 12.25 100.0 MEG8-234 lncRNA spinal cord (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 206.00 3.00 0.70 100.0 MEG8-234 lncRNA spinal cord (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 926.00 65.53 3.15 100.0 SNHG17-252 lncRNA spinal cord (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 7963.00 28.26 27.05 61.3 SNHG14-288 lncRNA spinal cord (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 15557.00 55.21 52.85 90.41 SNHG14-288 lncRNA spinal cord (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 2085.00 5.48 7.08 100.0 SNHG14-295 lncRNA spinal cord (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 4576.00 76.66 15.55 100.0 MEG8-240 lncRNA spinal cord (Tissue)