ENCFF001RLU

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 30927.00 17.12 105.07 56.25 ENST00000651540 lncRNA spinal cord (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 5475.00 3.03 18.60 100.0 ENST00000651540 lncRNA spinal cord (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 51029.00 28.25 173.36 79.3 ENST00000651540 lncRNA spinal cord (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 23390.00 1.81 79.46 100.0 MIRLET7A1HG-203 lncRNA spinal cord (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 15924.00 89.47 54.10 100.0 MEG8-225 lncRNA spinal cord (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 170681.00 68.84 579.84 100.0 SNHG29-232 lncRNA spinal cord (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 98.00 0.04 0.33 100.0 SNHG29-232 lncRNA spinal cord (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 492.00 0.20 1.67 100.0 SNHG29-232 lncRNA spinal cord (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 6535.00 2.64 22.20 100.0 SNHG29-232 lncRNA spinal cord (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 17522.00 7.07 59.53 100.0 SNHG29-232 lncRNA spinal cord (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 43781.00 17.66 148.73 100.0 SNHG29-232 lncRNA spinal cord (Tissue)
ENST00000654356.2 ENST00000654356.2_463_540_+ 463–540 1.00 0.00 0.00 100.0 SNHG29-232 lncRNA spinal cord (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 541.00 0.22 1.84 100.0 SNHG14-234 lncRNA spinal cord (Tissue)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 94747.00 39.22 321.88 96.59 SNHG14-234 lncRNA spinal cord (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 1599.00 0.66 5.43 100.0 SNHG14-234 lncRNA spinal cord (Tissue)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 14142.00 5.85 48.04 100.0 SNHG14-234 lncRNA spinal cord (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 34151.00 14.14 116.02 100.0 SNHG14-234 lncRNA spinal cord (Tissue)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 25729.00 10.65 87.41 96.22 SNHG14-234 lncRNA spinal cord (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 2559.00 3.14 8.69 61.34 ENST00000655317 lncRNA spinal cord (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 16160.00 19.80 54.90 100.0 ENST00000655317 lncRNA spinal cord (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 2882.00 3.53 9.79 34.36 ENST00000655317 lncRNA spinal cord (Tissue)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 4468.00 5.48 15.18 100.0 ENST00000655317 lncRNA spinal cord (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 2485.00 14.91 8.44 91.43 LINC01962-202 lncRNA spinal cord (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 11159.00 66.94 37.91 100.0 LINC01962-202 lncRNA spinal cord (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 432.00 2.59 1.47 100.0 LINC01962-202 lncRNA spinal cord (Tissue)