ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 27.00 2.38 0.04 100.0 RNA5SP77-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 22620.00 27.25 37.55 100.0 SNORD114-22-201 snoRNA temporal lobe (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 56842.00 68.48 94.35 99.32 SNORD114-22-201 snoRNA temporal lobe (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 1565.00 11.94 2.60 100.0 SNORD6-201 snoRNA temporal lobe (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 9431.00 71.98 15.65 100.0 SNORD6-201 snoRNA temporal lobe (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 528.00 1.09 0.88 100.0 RNY3-201 misc RNA temporal lobe (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 11335.59 10.66 18.82 47.41 SNORD82-201 snoRNA temporal lobe (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 571.00 0.54 0.95 100.0 SNORD82-201 snoRNA temporal lobe (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 519.00 0.49 0.86 100.0 SNORD82-201 snoRNA temporal lobe (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 7217.00 6.79 11.98 84.88 SNORD82-201 snoRNA temporal lobe (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 273.00 0.26 0.45 100.0 SNORD82-201 snoRNA temporal lobe (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 61569.00 57.92 102.20 97.31 SNORD82-201 snoRNA temporal lobe (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 13046.02 12.27 21.65 54.57 SNORD82-201 snoRNA temporal lobe (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 15411.00 94.73 25.58 96.31 MIR146B-201 miRNA temporal lobe (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 111.00 31.53 0.18 100.0 SNHG20-201 lncRNA temporal lobe (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 238.00 15.32 0.40 100.0 ATP5MK-205 protein coding temporal lobe (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 290.00 18.66 0.48 100.0 ATP5MK-205 protein coding temporal lobe (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 11.00 6.79 0.02 100.0 LINC01556-201 lncRNA temporal lobe (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 43.00 56.58 0.07 100.0 ATAD3A-202 protein coding temporal lobe (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 13796.00 53.31 22.90 76.47 TMC5-202 protein coding temporal lobe (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 18.00 25.71 0.03 100.0 ZMYM2-203 protein coding temporal lobe (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 3001.00 10.95 4.98 100.0 RNVU1-7-201 snRNA temporal lobe (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 1620.00 30.50 2.69 100.0 SNORD24-201 snoRNA temporal lobe (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 898.00 45.89 1.49 100.0 Y_RNA.389-201 misc RNA temporal lobe (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 769.00 1.39 1.28 100.0 SNORD101-201 snoRNA temporal lobe (Tissue)