ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 5620.00 36.78 9.33 77.12 SNORD117-201 snoRNA temporal lobe (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 2335.00 15.28 3.88 29.35 SNORD117-201 snoRNA temporal lobe (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 1408.00 4.06 2.34 100.0 SNORD114-3-201 snoRNA temporal lobe (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 1170.00 3.38 1.94 100.0 SNORD114-3-201 snoRNA temporal lobe (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 28248.00 81.49 46.89 94.83 SNORD114-3-201 snoRNA temporal lobe (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 23.00 0.89 0.04 100.0 RNA5SP298-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 62205.00 34.06 103.25 100.0 SNORD115-38-201 snoRNA temporal lobe (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 70009.00 32.91 116.21 100.0 SNORD115-10-201 snoRNA temporal lobe (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 14422.00 75.15 23.94 100.0 SNORD113-9-201 snoRNA temporal lobe (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 6055.00 37.74 10.05 100.0 SNORD115-20-201 snoRNA temporal lobe (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 833.00 4.28 1.38 100.0 SNORD38A-201 snoRNA temporal lobe (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 322.00 1.66 0.53 100.0 SNORD38A-201 snoRNA temporal lobe (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 16380.00 84.25 27.19 100.0 SNORD38A-201 snoRNA temporal lobe (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 43933.00 89.91 72.92 97.72 SNORD114-20-201 snoRNA temporal lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 574.00 4.09 0.95 100.0 7SK.1-201 misc RNA temporal lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 1016.00 7.23 1.69 82.13 7SK.1-201 misc RNA temporal lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 1352.00 9.62 2.24 100.0 7SK.1-201 misc RNA temporal lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 513.00 3.65 0.85 57.97 7SK.1-201 misc RNA temporal lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 206.00 1.47 0.34 100.0 7SK.1-201 misc RNA temporal lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 823.00 5.86 1.37 80.92 7SK.1-201 misc RNA temporal lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 16.00 0.11 0.03 100.0 7SK.1-201 misc RNA temporal lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 1556.00 11.08 2.58 80.71 7SK.1-201 misc RNA temporal lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 1902.00 13.54 3.16 100.0 7SK.1-201 misc RNA temporal lobe (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 744.00 40.52 1.23 100.0 SNORD14C-201 snoRNA temporal lobe (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 79026.00 39.19 131.17 100.0 SNORD115-44-201 snoRNA temporal lobe (Tissue)