ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 10975.00 0.57 18.22 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 294.00 0.02 0.49 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 1351.00 9.74 2.24 100.0 FTX-219 lncRNA temporal lobe (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 4572.00 32.97 7.59 79.58 FTX-219 lncRNA temporal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 222.00 3.92 0.37 53.37 CTC1-214 protein coding temporal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 28.00 0.49 0.05 21.71 CTC1-214 protein coding temporal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 794.00 14.02 1.32 58.55 CTC1-214 protein coding temporal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 194.00 3.43 0.32 46.63 CTC1-214 protein coding temporal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 1346.00 23.77 2.23 88.96 CTC1-214 protein coding temporal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 24.00 0.42 0.04 100.0 CTC1-214 protein coding temporal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 555.00 9.80 0.92 100.0 CTC1-214 protein coding temporal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 628.00 11.09 1.04 100.0 CTC1-214 protein coding temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 3682.00 2.99 6.11 68.81 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 893.00 0.72 1.48 99.0 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 3437.00 2.79 5.70 100.0 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 7118.00 5.78 11.81 56.59 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 3825.00 3.11 6.35 100.0 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 4443.00 3.61 7.37 100.0 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 1088.00 0.88 1.81 100.0 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 1371.00 1.11 2.28 100.0 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 2471.00 2.01 4.10 100.0 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 11306.00 9.18 18.77 52.29 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 3937.00 3.20 6.53 100.0 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 20702.00 16.81 34.36 82.83 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 51084.00 1.25 84.79 100.0 MIRLET7A1HG-203 lncRNA temporal lobe (Tissue)