ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 177.00 8.88 0.29 100.0 SCARNA4-202 scaRNA temporal lobe (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 3589.00 73.39 5.96 100.0 ENST00000625572 miRNA temporal lobe (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 23251.00 91.84 38.59 100.0 ENST00000628177 snoRNA temporal lobe (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 2841.00 91.26 4.72 100.0 ENST00000630615 snoRNA temporal lobe (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 131.00 52.82 0.22 100.0 DMRT2-209 protein coding temporal lobe (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 32.00 12.90 0.05 100.0 DMRT2-209 protein coding temporal lobe (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 705.00 5.59 1.17 100.0 SNORD98-201 snoRNA temporal lobe (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 8649.00 68.60 14.36 100.0 SNORD98-201 snoRNA temporal lobe (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 267615.72 45.35 444.20 47.95 MIR106AHG-201 lncRNA temporal lobe (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 353.99 0.06 0.59 18.73 MIR106AHG-201 lncRNA temporal lobe (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 320.00 0.05 0.53 100.0 MIR106AHG-201 lncRNA temporal lobe (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 1423.68 0.24 2.36 75.33 MIR106AHG-201 lncRNA temporal lobe (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 813.00 9.27 1.35 100.0 MEG8-222 lncRNA temporal lobe (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 3888.00 44.34 6.45 100.0 MEG8-222 lncRNA temporal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_4119_4213_+ 4119–4213 1.00 0.00 0.00 100.0 SNHG14-224 lncRNA temporal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 37988.00 9.77 63.05 94.66 SNHG14-224 lncRNA temporal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 96014.00 24.70 159.37 88.03 SNHG14-224 lncRNA temporal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 46749.00 12.03 77.60 100.0 SNHG14-224 lncRNA temporal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 13214.00 3.40 21.93 83.98 SNHG14-224 lncRNA temporal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 1020.00 0.26 1.69 100.0 SNHG14-224 lncRNA temporal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 10748.00 2.77 17.84 40.31 SNHG14-224 lncRNA temporal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 62386.00 16.05 103.55 76.79 SNHG14-224 lncRNA temporal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 38331.00 9.86 63.62 60.9 SNHG14-224 lncRNA temporal lobe (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 2591.68 30.01 4.30 71.75 5S_rRNA.20-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 475.00 5.15 0.79 100.0 HSPA9-211 retained intron temporal lobe (Tissue)