ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 3.00 0.04 0.00 100.0 RNA5-8SN2-201 rRNA temporal lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 502.00 5.94 0.83 100.0 RNA5-8SN2-201 rRNA temporal lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 130.00 1.54 0.22 100.0 RNA5-8SN2-201 rRNA temporal lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 1518.00 17.96 2.52 60.53 RNA5-8SN2-201 rRNA temporal lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 14.60 0.17 0.02 63.49 RNA5-8SN2-201 rRNA temporal lobe (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 5.00 100.00 0.01 100.0 MIR7974-201 miRNA temporal lobe (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 53.00 8.59 0.09 100.0 MIR376A1-201 miRNA temporal lobe (Tissue)
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 227.00 36.79 0.38 100.0 MIR376A1-201 miRNA temporal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 3236.00 0.99 5.37 100.0 U2.3-201 snRNA temporal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 2768.06 0.85 4.59 35.89 U2.3-201 snRNA temporal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 210599.00 64.70 349.56 99.37 U2.3-201 snRNA temporal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 16.00 0.00 0.03 100.0 U2.3-201 snRNA temporal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 8113.00 2.49 13.47 50.7 U2.3-201 snRNA temporal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 8315.00 2.55 13.80 37.36 U2.3-201 snRNA temporal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 5524.00 1.70 9.17 85.74 U2.3-201 snRNA temporal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 5054.39 1.55 8.39 65.54 U2.3-201 snRNA temporal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 274.00 0.08 0.45 100.0 U2.3-201 snRNA temporal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 23.00 0.01 0.04 100.0 U2.3-201 snRNA temporal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 111.00 0.03 0.18 100.0 U2.3-201 snRNA temporal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 516.00 0.16 0.86 100.0 U2.3-201 snRNA temporal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 5790.86 1.78 9.61 51.87 U2.3-201 snRNA temporal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 4817.62 1.48 8.00 46.43 U2.3-201 snRNA temporal lobe (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 8315.00 2.57 13.80 100.0 U2.6-201 snRNA temporal lobe (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 2780.00 0.91 4.61 49.41 ENST00000619323 lncRNA temporal lobe (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 294610.00 95.99 489.01 98.4 ENST00000619323 lncRNA temporal lobe (Tissue)