ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 2743.00 0.32 4.55 75.69 EIF4A2-219 retained intron temporal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 4950.00 0.57 8.22 58.03 EIF4A2-219 retained intron temporal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_360_408_+ 360–408 255.00 0.03 0.42 70.83 EIF4A2-219 retained intron temporal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_362_405_+ 362–405 4897.00 0.57 8.13 62.38 EIF4A2-219 retained intron temporal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 408.00 0.05 0.68 100.0 EIF4A2-219 retained intron temporal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 6389.00 0.74 10.60 79.47 EIF4A2-219 retained intron temporal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 97741.00 11.34 162.24 65.52 EIF4A2-219 retained intron temporal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 668842.00 77.60 1110.18 98.51 EIF4A2-219 retained intron temporal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 3536.00 0.41 5.87 100.0 EIF4A2-219 retained intron temporal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 2193.00 0.25 3.64 45.56 EIF4A2-219 retained intron temporal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_343_434_+ 343–434 8.00 0.00 0.01 100.0 EIF4A2-219 retained intron temporal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 151.00 0.02 0.25 100.0 EIF4A2-219 retained intron temporal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 242.00 0.03 0.40 100.0 EIF4A2-219 retained intron temporal lobe (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 45564.00 93.15 75.63 100.0 RPS8-207 protein coding CDS not defined temporal lobe (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 488.00 14.78 0.81 100.0 RPL7A-206 protein coding CDS not defined temporal lobe (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 625.00 18.93 1.04 100.0 RPL7A-206 protein coding CDS not defined temporal lobe (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 508.00 15.39 0.84 100.0 RPL7A-206 protein coding CDS not defined temporal lobe (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 2116.00 0.11 3.51 100.0 RPL21-209 retained intron temporal lobe (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 100406.00 5.32 166.66 98.49 RPL21-209 retained intron temporal lobe (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 1750903.00 92.83 2906.25 99.76 RPL21-209 retained intron temporal lobe (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 9182.00 0.49 15.24 100.0 RPL21-209 retained intron temporal lobe (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 3400.00 0.18 5.64 100.0 RPL21-209 retained intron temporal lobe (Tissue)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 81.00 31.76 0.13 100.0 GABRE-209 retained intron temporal lobe (Tissue)
ENST00000488946.1 ENST00000488946.1_148_235_+ 148–235 18.00 0.01 0.03 100.0 RPL13A-212 retained intron temporal lobe (Tissue)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 4.00 0.00 0.01 100.0 RPL13A-212 retained intron temporal lobe (Tissue)