ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 23.00 0.19 0.08 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 915.00 7.58 3.24 98.49 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 961.00 51.12 3.40 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 522.00 0.08 1.85 81.06 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 88.00 0.01 0.31 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 80.00 0.01 0.28 76.92 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 81646.00 12.06 288.84 43.16 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 163.00 0.02 0.58 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 10.00 0.00 0.04 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 676.00 0.10 2.39 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 295.00 56.95 1.04 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 39.00 0.01 0.14 100.0 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 10006.00 83.20 35.40 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 545.00 4.53 1.93 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 1518.00 42.37 5.37 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 1.00 0.05 0.00 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 776.00 0.21 2.75 14.3 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 4.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 125.00 13.59 0.44 91.91 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 44.00 4.78 0.16 26.04 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 38.00 0.73 0.13 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 1468.00 0.22 5.19 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 531109.00 78.53 1878.90 95.84 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 174.00 13.79 0.62 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 15.00 0.17 0.05 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA parietal lobe (Tissue)