ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 559.00 2.14 1.98 100.0 GAS5-377 lncRNA parietal lobe (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 873.00 3.35 3.09 100.0 GAS5-377 lncRNA parietal lobe (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 20375.00 78.12 72.08 100.0 GAS5-377 lncRNA parietal lobe (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 6.00 100.00 0.02 100.0 MIR205HG-245 lncRNA parietal lobe (Tissue)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 2004.00 30.85 7.09 100.0 TAF12-DT-204 lncRNA parietal lobe (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 242410.00 92.27 857.57 99.56 ZFAS1-238 lncRNA parietal lobe (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 1523.00 0.58 5.39 100.0 ZFAS1-238 lncRNA parietal lobe (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 4151.00 1.58 14.68 100.0 ZFAS1-238 lncRNA parietal lobe (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1895.00 0.72 6.70 100.0 ZFAS1-238 lncRNA parietal lobe (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 51464.00 84.80 182.06 100.0 ZFAS1-242 lncRNA parietal lobe (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 5211.00 8.59 18.43 100.0 ZFAS1-242 lncRNA parietal lobe (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 265.00 45.14 0.94 100.0 ENST00000837997 lncRNA parietal lobe (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 145.00 24.70 0.51 100.0 ENST00000837997 lncRNA parietal lobe (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 4520.00 73.72 15.99 83.52 ENST00000839036 lncRNA parietal lobe (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 16.00 12.21 0.06 100.0 ENST00000849527 lncRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 9328.00 18.56 33.00 20.93 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 1.00 0.00 0.00 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 776.00 0.07 2.75 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 1816.00 52.82 6.42 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 805.00 23.41 2.85 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 12.00 3.32 0.04 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 18.00 1.76 0.06 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 5542.00 62.17 19.61 79.49 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 41.00 0.00 0.15 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 3010.00 48.99 10.65 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA parietal lobe (Tissue)