ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 237.00 0.03 0.84 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 538502.00 62.44 1905.06 99.79 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 1938.00 0.22 6.86 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 3365.00 0.39 11.90 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 995.00 0.12 3.52 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 1282.00 0.15 4.54 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 1074.00 0.12 3.80 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 559.00 0.06 1.98 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 668.00 0.08 2.36 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 493.00 0.06 1.74 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 8196.00 0.95 28.99 82.06 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 5629.00 0.65 19.91 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 23149.00 2.68 81.89 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 40842.00 4.74 144.49 96.97 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 159447.00 18.49 564.07 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 278.00 0.03 0.98 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 4971.00 0.58 17.59 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 23153.00 2.68 81.91 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 123.00 0.01 0.44 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 949.00 10.37 3.36 100.0 FTX-219 lncRNA parietal lobe (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 3726.00 40.72 13.18 81.21 FTX-219 lncRNA parietal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 93.00 3.93 0.33 42.08 CTC1-214 protein coding parietal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 12.00 0.51 0.04 48.0 CTC1-214 protein coding parietal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 400.00 16.90 1.42 53.19 CTC1-214 protein coding parietal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 128.00 5.41 0.45 57.92 CTC1-214 protein coding parietal lobe (Tissue)