ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 180.00 0.13 0.64 100.0 RPL4-202 retained intron parietal lobe (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 5.00 0.02 0.02 100.0 ENST00000563103 lncRNA parietal lobe (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 6347.00 33.69 22.45 100.0 RPL4-207 retained intron parietal lobe (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 877.00 4.66 3.10 100.0 RPL4-207 retained intron parietal lobe (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 9234.00 76.69 32.67 93.9 ENST00000565336 lncRNA parietal lobe (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 983.00 8.16 3.48 70.92 ENST00000565336 lncRNA parietal lobe (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 4303.00 1.29 15.22 100.0 RBMX-210 retained intron parietal lobe (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 651.00 0.19 2.30 100.0 RBMX-210 retained intron parietal lobe (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 3442.00 1.03 12.18 100.0 RBMX-210 retained intron parietal lobe (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 272296.00 81.54 963.30 86.88 RBMX-210 retained intron parietal lobe (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 81.00 1.23 0.29 100.0 RPL4-214 retained intron parietal lobe (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 3608.00 54.91 12.76 100.0 RPL4-214 retained intron parietal lobe (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 23709.37 48.50 83.88 61.81 POLG-DT-202 lncRNA parietal lobe (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 11463.09 23.45 40.55 31.96 POLG-DT-202 lncRNA parietal lobe (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 820.00 1.68 2.90 100.0 POLG-DT-202 lncRNA parietal lobe (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 3062.00 62.20 10.83 100.0 ENST00000570843 lncRNA parietal lobe (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 10139.00 80.99 35.87 100.0 MIR497HG-207 lncRNA parietal lobe (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 86712.00 99.60 306.76 99.81 MIR22HG-212 lncRNA parietal lobe (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 156.00 0.23 0.55 39.9 SNORD53B-201 snoRNA parietal lobe (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 61868.00 92.25 218.87 95.74 SNORD53B-201 snoRNA parietal lobe (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 235.00 0.35 0.83 60.1 SNORD53B-201 snoRNA parietal lobe (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 672.00 90.81 2.38 100.0 ENST00000578036 lncRNA parietal lobe (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 2626.00 84.22 9.29 100.0 RPL23A-207 protein coding parietal lobe (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 1382.00 90.98 4.89 100.0 MIR744-201 miRNA parietal lobe (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 18.00 56.25 0.06 100.0 MIR378C-201 miRNA parietal lobe (Tissue)