ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 174.00 3.75 0.62 100.0 B4GALNT2-202 protein coding parietal lobe (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 1220.00 89.71 4.32 100.0 NDE1-202 protein coding parietal lobe (Tissue)
ENST00000401172.1 ENST00000401172.1_46_67_+ 46–67 12.00 92.31 0.04 100.0 MIR208B-201 miRNA parietal lobe (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 45.00 54.88 0.16 100.0 MIR450B-201 miRNA parietal lobe (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 175.00 54.18 0.62 100.0 MIR887-201 miRNA parietal lobe (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 2637.00 90.12 9.33 100.0 MIR889-201 miRNA parietal lobe (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 4595.00 81.27 16.26 100.0 SNORD111-201 snoRNA parietal lobe (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 2172.00 56.52 7.68 77.38 SNORD88A-201 snoRNA parietal lobe (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 263.00 92.93 0.93 100.0 MIR548K-201 miRNA parietal lobe (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 274.00 62.13 0.97 100.0 MIR320B2-201 miRNA parietal lobe (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 696.00 94.95 2.46 100.0 MIR1271-201 miRNA parietal lobe (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 793.00 1.73 2.81 100.0 SNORD100-201 snoRNA parietal lobe (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 192.00 0.42 0.68 100.0 SNORD100-201 snoRNA parietal lobe (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 32.00 0.07 0.11 100.0 SNORD100-201 snoRNA parietal lobe (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 42869.00 93.72 151.66 100.0 SNORD100-201 snoRNA parietal lobe (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 3990.00 47.74 14.12 100.0 SNORD111B-201 snoRNA parietal lobe (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 60.00 0.84 0.21 100.0 RNU2-36P-201 snRNA parietal lobe (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 3387.00 47.17 11.98 100.0 RNU2-36P-201 snRNA parietal lobe (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 383.00 0.78 1.35 100.0 SNORD19C-201 snoRNA parietal lobe (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 45715.00 93.33 161.73 98.62 SNORD19C-201 snoRNA parietal lobe (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 1976.00 1.27 6.99 100.0 SNORD12B-201 snoRNA parietal lobe (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 88.00 0.06 0.31 100.0 SNORD12B-201 snoRNA parietal lobe (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 137684.00 88.22 487.08 98.39 SNORD12B-201 snoRNA parietal lobe (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 7180.00 35.92 25.40 100.0 Y_RNA.609-201 misc RNA parietal lobe (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 495.00 19.12 1.75 100.0 Y_RNA.612-201 misc RNA parietal lobe (Tissue)