ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 87.00 68.50 0.31 100.0 MIR501-201 miRNA parietal lobe (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 8472.00 92.80 29.97 100.0 MIR769-201 miRNA parietal lobe (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 21.00 58.33 0.07 100.0 KRTAP19-1-201 protein coding parietal lobe (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 2027.00 35.96 7.17 100.0 MIR708-201 miRNA parietal lobe (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 24.00 80.00 0.08 100.0 MIR509-3-201 miRNA parietal lobe (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 131.00 49.62 0.46 100.0 MIR543-201 miRNA parietal lobe (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 203.00 94.42 0.72 100.0 MIR301B-201 miRNA parietal lobe (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 7069.00 58.61 25.01 85.88 RNU1-82P-201 snRNA parietal lobe (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 35.00 0.29 0.12 100.0 SNORD66-201 snoRNA parietal lobe (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 414.00 3.44 1.46 100.0 SNORD66-201 snoRNA parietal lobe (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 1847.00 15.35 6.53 75.05 SNORD66-201 snoRNA parietal lobe (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 5308.00 44.11 18.78 100.0 SNORD66-201 snoRNA parietal lobe (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 434.00 73.43 1.54 100.0 U3.17-201 snoRNA parietal lobe (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 2311.00 68.47 8.18 100.0 SNORD17-201 snoRNA parietal lobe (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 32.00 16.84 0.11 100.0 SNORD72-201 snoRNA parietal lobe (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 2547.00 78.85 9.01 100.0 SNORD70B-201 snoRNA parietal lobe (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 6339.00 51.01 22.43 96.43 RNY4P18-201 misc RNA parietal lobe (Tissue)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 119977.00 94.95 424.44 100.0 SNORD90-201 snoRNA parietal lobe (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 818.00 0.65 2.89 11.4 SNORD90-201 snoRNA parietal lobe (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 121200.00 92.58 428.77 100.0 SNORD69-201 snoRNA parietal lobe (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 1227.00 0.94 4.34 100.0 SNORD69-201 snoRNA parietal lobe (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 1097.00 0.84 3.88 100.0 SNORD69-201 snoRNA parietal lobe (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 1874.00 1.43 6.63 100.0 SNORD69-201 snoRNA parietal lobe (Tissue)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 830.00 51.39 2.94 71.8 SNORD70-201 snoRNA parietal lobe (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 3225.00 69.50 11.41 85.0 B4GALNT2-202 protein coding parietal lobe (Tissue)