ENCFF001REQ

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 2200.00 17.25 5.58 86.44 7SK.1-201 misc RNA K562 (Cell line)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 36.00 0.28 0.09 100.0 7SK.1-201 misc RNA K562 (Cell line)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 130.00 1.02 0.33 65.0 7SK.1-201 misc RNA K562 (Cell line)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 60.00 0.47 0.15 100.0 7SK.1-201 misc RNA K562 (Cell line)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 173.00 1.36 0.44 33.4 7SK.1-201 misc RNA K562 (Cell line)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 58.00 0.45 0.15 100.0 7SK.1-201 misc RNA K562 (Cell line)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 483.00 3.79 1.23 100.0 7SK.1-201 misc RNA K562 (Cell line)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 194.00 1.52 0.49 100.0 7SK.1-201 misc RNA K562 (Cell line)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 2065.00 16.19 5.24 75.17 7SK.1-201 misc RNA K562 (Cell line)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 38.00 9.03 0.10 100.0 SNORD14C-201 snoRNA K562 (Cell line)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 2811.00 40.27 7.13 100.0 RNA5SP77-201 rRNA pseudogene K562 (Cell line)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 71.00 23.20 0.18 100.0 SNORD114-22-201 snoRNA K562 (Cell line)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 140.00 45.75 0.36 76.5 SNORD114-22-201 snoRNA K562 (Cell line)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 645.00 1.24 1.64 100.0 SNORD6-201 snoRNA K562 (Cell line)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 44081.00 84.71 111.87 100.0 SNORD6-201 snoRNA K562 (Cell line)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 422.00 6.82 1.07 100.0 RNY3-201 misc RNA K562 (Cell line)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 2500.99 12.73 6.35 26.56 SNORD82-201 snoRNA K562 (Cell line)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 1610.00 8.20 4.09 100.0 SNORD82-201 snoRNA K562 (Cell line)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 6896.45 35.11 17.50 73.23 SNORD82-201 snoRNA K562 (Cell line)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 2896.00 14.74 7.35 100.0 SNORD82-201 snoRNA K562 (Cell line)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 1611.00 8.20 4.09 100.0 SNORD82-201 snoRNA K562 (Cell line)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 796.00 4.05 2.02 83.18 SNORD82-201 snoRNA K562 (Cell line)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 715.00 3.64 1.81 81.16 SNORD82-201 snoRNA K562 (Cell line)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 1176334.00 96.06 2985.41 97.82 MIR146B-201 miRNA K562 (Cell line)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 24.00 9.92 0.06 100.0 SNHG20-201 lncRNA K562 (Cell line)