ENCFF001REQ

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 16536.00 3.94 41.97 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 102900.00 24.52 261.15 90.44 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 6533.00 1.56 16.58 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 44105.00 10.51 111.93 82.37 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 6155.00 1.47 15.62 34.97 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 8689.00 2.07 22.05 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 4051.00 0.97 10.28 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 22.00 5.24 0.06 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 87379.00 27.42 221.76 96.89 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 75.00 0.42 0.19 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 943.00 5.28 2.39 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 2123.00 5.36 5.39 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 10493.00 11.63 26.63 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 3208.00 1.01 8.14 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 63945.00 20.07 162.29 70.91 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 71.00 0.37 0.18 16.1 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 370.00 1.93 0.94 89.81 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 2401.00 7.44 6.09 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 8341.00 2.05 21.17 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 22944.00 5.63 58.23 61.42 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 77.00 0.36 0.20 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 4551.00 10.20 11.55 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 7243.00 1.81 18.38 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 4795.00 5.66 12.17 74.91 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 218.00 0.26 0.55 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA K562 (Cell line)