ENCFF001REL

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 4049.00 1.00 7.53 82.51 RNA5SP145-201 rRNA pseudogene K562 (Cell line)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 30.00 10.68 0.06 100.0 Y_RNA.105-201 misc RNA K562 (Cell line)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 471.00 13.21 0.88 100.0 RNY4P9-201 misc RNA K562 (Cell line)
ENST00000363286.1 ENST00000363286.1_1_69_+ 1–69 140.00 1.61 0.26 100.0 RNU5B-1-201 snRNA K562 (Cell line)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 313.00 3.61 0.58 100.0 RNU5B-1-201 snRNA K562 (Cell line)
ENST00000363286.1 ENST00000363286.1_1_86_+ 1–86 228.00 2.63 0.42 100.0 RNU5B-1-201 snRNA K562 (Cell line)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 1415.00 16.31 2.63 100.0 RNU5B-1-201 snRNA K562 (Cell line)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 489.00 5.63 0.91 100.0 RNU5B-1-201 snRNA K562 (Cell line)
ENST00000363286.1 ENST00000363286.1_1_78_+ 1–78 512.00 5.90 0.95 72.32 RNU5B-1-201 snRNA K562 (Cell line)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 2199.00 31.07 4.09 96.7 RNY4P27-201 misc RNA K562 (Cell line)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 260.00 3.67 0.48 77.61 RNY4P27-201 misc RNA K562 (Cell line)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 294.00 8.97 0.55 100.0 Y_RNA.136-201 misc RNA K562 (Cell line)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 195.00 60.94 0.36 79.27 SNORD114-25-201 snoRNA K562 (Cell line)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 275.00 88.14 0.51 100.0 SNORD113-7-201 snoRNA K562 (Cell line)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 185.00 20.15 0.34 100.0 Y_RNA.181-201 misc RNA K562 (Cell line)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 221.00 2.04 0.41 100.0 RNY1-201 misc RNA K562 (Cell line)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 391.00 3.61 0.73 100.0 RNY1-201 misc RNA K562 (Cell line)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 1556.85 14.36 2.89 41.11 RNY1-201 misc RNA K562 (Cell line)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 1725.32 15.92 3.21 55.03 RNY1-201 misc RNA K562 (Cell line)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 369.00 3.40 0.69 100.0 RNY1-201 misc RNA K562 (Cell line)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 1.00 14.29 0.00 100.0 SNORD115-42-201 snoRNA K562 (Cell line)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 29716.00 5.20 55.24 100.0 RNA5SP202-201 rRNA pseudogene K562 (Cell line)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 4117.00 0.72 7.65 100.0 RNA5SP202-201 rRNA pseudogene K562 (Cell line)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 4609.00 0.81 8.57 100.0 RNA5SP202-201 rRNA pseudogene K562 (Cell line)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 5725.05 1.00 10.64 35.2 RNA5SP202-201 rRNA pseudogene K562 (Cell line)