ENCFF001REL

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 5066.00 1.23 9.42 39.51 RNA5SP370-201 rRNA pseudogene K562 (Cell line)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 564.00 38.82 1.05 100.0 SNORA31-201 snoRNA K562 (Cell line)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 71355.00 17.37 132.65 100.0 RNA5SP389-201 rRNA pseudogene K562 (Cell line)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 63016.00 15.34 117.14 89.58 RNA5SP389-201 rRNA pseudogene K562 (Cell line)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 15243.00 3.71 28.34 53.17 RNA5SP389-201 rRNA pseudogene K562 (Cell line)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 2858.00 0.70 5.31 100.0 RNA5SP389-201 rRNA pseudogene K562 (Cell line)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 1909.00 4.17 3.55 77.66 RNU5A-1-201 snRNA K562 (Cell line)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 5336.00 11.66 9.92 78.89 RNU5A-1-201 snRNA K562 (Cell line)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 5079.88 11.10 9.44 41.73 RNU5A-1-201 snRNA K562 (Cell line)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 2329.00 5.09 4.33 82.59 RNU5A-1-201 snRNA K562 (Cell line)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 1751.00 3.83 3.26 67.35 RNU5A-1-201 snRNA K562 (Cell line)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 199.00 0.43 0.37 100.0 RNU5A-1-201 snRNA K562 (Cell line)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 1600.00 3.50 2.97 70.61 RNU5A-1-201 snRNA K562 (Cell line)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 1841.00 4.02 3.42 39.46 RNU5A-1-201 snRNA K562 (Cell line)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 912.63 1.99 1.70 43.33 RNU5A-1-201 snRNA K562 (Cell line)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 1241.00 2.71 2.31 54.12 RNU5A-1-201 snRNA K562 (Cell line)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 295.00 0.64 0.55 100.0 RNU5A-1-201 snRNA K562 (Cell line)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 7760.45 16.95 14.43 67.31 RNU5A-1-201 snRNA K562 (Cell line)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 2244.00 4.90 4.17 100.0 RNU5A-1-201 snRNA K562 (Cell line)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 906.79 1.98 1.69 32.74 RNU5A-1-201 snRNA K562 (Cell line)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 999.00 2.18 1.86 47.64 RNU5A-1-201 snRNA K562 (Cell line)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 32.00 59.26 0.06 100.0 SNORD114-14-201 snoRNA K562 (Cell line)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 131.00 5.78 0.24 100.0 SNORD104-201 snoRNA K562 (Cell line)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 31.00 1.37 0.06 100.0 SNORD104-201 snoRNA K562 (Cell line)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 15101.00 31.29 28.07 72.83 RNA5SP358-201 rRNA pseudogene K562 (Cell line)