ENCFF001REL

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 22325.00 33.03 41.50 89.09 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 3317.00 4.91 6.17 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 15655.00 20.13 29.10 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 6734.00 17.20 12.52 82.04 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 5961.00 9.32 11.08 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 15.00 0.50 0.03 71.43 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 263.00 8.82 0.49 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 9.00 0.30 0.02 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 815.00 27.34 1.52 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 524.00 0.42 0.97 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 24.00 0.55 0.04 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 357.00 3.87 0.66 81.69 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 3128.00 33.88 5.81 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 80.00 0.87 0.15 18.31 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 4663.00 9.12 8.67 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 4023.00 7.87 7.48 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 15.00 1.29 0.03 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 17637.00 76.15 32.79 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 15.00 0.31 0.03 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 3665.00 1.24 6.81 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 1817.00 0.61 3.38 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 11813.00 3.99 21.96 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 6364.00 2.15 11.83 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 20.00 0.01 0.04 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 2551.00 0.86 4.74 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA K562 (Cell line)