ENCFF001REL

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 301.00 5.11 0.56 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 1656.00 9.53 3.08 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 8687.00 11.17 16.15 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 2385.00 0.78 4.43 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 68491.00 22.40 127.32 79.01 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 102.00 0.78 0.19 9.86 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 932.00 7.15 1.73 92.92 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 2394.00 11.35 4.45 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 12174.00 3.73 22.63 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 14893.00 4.56 27.69 69.82 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 89.00 0.86 0.17 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 2974.00 15.37 5.53 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 4909.00 1.66 9.13 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 4442.00 9.69 8.26 83.17 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 205.00 0.45 0.38 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 188.00 0.41 0.35 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 1416.00 3.09 2.63 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 2288.00 4.99 4.25 73.64 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 760.00 1.66 1.41 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 46272.00 39.68 86.02 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 13467.00 11.55 25.03 68.25 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 37544.00 35.40 69.79 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 1944.00 2.88 3.61 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 34.00 0.05 0.06 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 6247.00 9.24 11.61 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA K562 (Cell line)