ENCFF001REL

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 43523.00 93.50 80.91 98.81 MIR30D-201 miRNA K562 (Cell line)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 15164.00 9.02 28.19 98.63 MIR126-201 miRNA K562 (Cell line)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 149949.00 89.22 278.75 100.0 MIR126-201 miRNA K562 (Cell line)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 1011.00 67.49 1.88 100.0 MIR374A-201 miRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 94565.00 6.82 175.79 99.07 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 7757.00 0.56 14.42 60.49 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 33715.00 2.43 62.67 71.52 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 13485.00 0.97 25.07 100.0 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 5062.00 0.37 9.41 29.5 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 2241.00 0.16 4.17 100.0 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 11873.45 0.86 22.07 55.23 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 60602.00 4.37 112.66 82.16 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 26411.00 1.91 49.10 54.51 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 14091.00 1.02 26.19 81.23 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 7808.00 0.56 14.51 100.0 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 10167.00 0.73 18.90 68.24 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 15075.48 1.09 28.02 50.8 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 18059.07 1.30 33.57 71.19 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 8643.00 0.62 16.07 36.52 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 19954.00 1.44 37.09 82.27 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 26720.17 1.93 49.67 48.86 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 171764.00 12.40 319.30 99.48 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 13986.00 1.01 26.00 48.21 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 174.00 5.84 0.32 100.0 Y_RNA.14-201 misc RNA K562 (Cell line)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 3176.00 26.78 5.90 100.0 RNU5E-1-201 snRNA K562 (Cell line)