ENCFF001REL

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 577.69 2.25 1.07 36.06 ENST00000756336 lncRNA K562 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 2036.00 7.94 3.78 100.0 ENST00000756336 lncRNA K562 (Cell line)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 530.30 2.07 0.99 82.34 ENST00000756336 lncRNA K562 (Cell line)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 2594.00 92.64 4.82 100.0 ENST00000756452 lncRNA K562 (Cell line)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 119.00 0.42 0.22 100.0 ENST00000760093 lncRNA K562 (Cell line)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 12.00 0.04 0.02 100.0 ENST00000760093 lncRNA K562 (Cell line)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 54.00 94.74 0.10 98.18 SNHG14-356 lncRNA K562 (Cell line)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 13700.00 25.70 25.47 96.29 LINC02806-241 lncRNA K562 (Cell line)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 1285.00 2.41 2.39 100.0 LINC02806-241 lncRNA K562 (Cell line)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 1016.00 1.91 1.89 100.0 LINC02806-241 lncRNA K562 (Cell line)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 7548.00 14.16 14.03 71.44 LINC02806-241 lncRNA K562 (Cell line)
ENST00000762395.1 ENST00000762395.1_307_324_+ 307–324 3847.00 7.22 7.15 100.0 LINC02806-241 lncRNA K562 (Cell line)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 6408.00 89.40 11.91 100.0 EHBP1-AS1-210 lncRNA K562 (Cell line)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 833.00 7.77 1.55 100.0 ENST00000770398 lncRNA K562 (Cell line)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 4134.00 38.54 7.68 100.0 ENST00000770398 lncRNA K562 (Cell line)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 24.00 0.22 0.04 100.0 ENST00000770398 lncRNA K562 (Cell line)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 2129.00 6.53 3.96 100.0 ENST00000771298 lncRNA K562 (Cell line)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 11.00 0.03 0.02 100.0 ENST00000771298 lncRNA K562 (Cell line)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 10423.00 31.96 19.38 67.81 ENST00000771298 lncRNA K562 (Cell line)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 126.00 0.39 0.23 100.0 ENST00000771298 lncRNA K562 (Cell line)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 8199.00 36.84 15.24 100.0 ENST00000772672 lncRNA K562 (Cell line)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 6.00 0.03 0.01 100.0 ENST00000772672 lncRNA K562 (Cell line)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 1607.00 7.22 2.99 100.0 ENST00000772672 lncRNA K562 (Cell line)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 322.00 41.66 0.60 100.0 ENST00000773843 lncRNA K562 (Cell line)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 20602.00 0.57 38.30 100.0 SNHG12-223 lncRNA K562 (Cell line)