ENCFF001REL

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 61.00 52.14 0.11 100.0 MIR200CHG-202 lncRNA K562 (Cell line)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 2.00 1.71 0.00 100.0 MIR200CHG-202 lncRNA K562 (Cell line)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 4340.00 46.66 8.07 100.0 SNHG16-266 lncRNA K562 (Cell line)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 636.00 6.84 1.18 100.0 SNHG16-266 lncRNA K562 (Cell line)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 291.00 3.13 0.54 100.0 SNHG16-266 lncRNA K562 (Cell line)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 94.00 1.01 0.17 100.0 SNHG16-266 lncRNA K562 (Cell line)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 12.00 57.14 0.02 100.0 MEG8-261 lncRNA K562 (Cell line)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 4740.00 50.88 8.81 100.0 NR2F2-AS1-327 lncRNA K562 (Cell line)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 26028.00 47.51 48.38 100.0 ENST00000747675 lncRNA K562 (Cell line)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 928.00 1.69 1.73 41.04 ENST00000747675 lncRNA K562 (Cell line)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 13003.00 23.73 24.17 100.0 ENST00000747675 lncRNA K562 (Cell line)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 695.00 1.27 1.29 42.82 ENST00000747675 lncRNA K562 (Cell line)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 638.00 1.16 1.19 40.74 ENST00000747675 lncRNA K562 (Cell line)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 25538.00 38.10 47.47 89.09 SNHG26-250 lncRNA K562 (Cell line)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 7090.00 10.58 13.18 40.1 SNHG26-250 lncRNA K562 (Cell line)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 2388.00 13.01 4.44 100.0 LINC02422-207 lncRNA K562 (Cell line)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 1260.00 5.78 2.34 100.0 ENST00000753088 lncRNA K562 (Cell line)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 149.00 0.68 0.28 100.0 ENST00000753088 lncRNA K562 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 1257.85 4.90 2.34 63.62 ENST00000756336 lncRNA K562 (Cell line)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 6857.00 26.74 12.75 100.0 ENST00000756336 lncRNA K562 (Cell line)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 230.00 0.90 0.43 100.0 ENST00000756336 lncRNA K562 (Cell line)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 689.00 2.69 1.28 100.0 ENST00000756336 lncRNA K562 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 637.55 2.49 1.19 12.18 ENST00000756336 lncRNA K562 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 4878.00 19.02 9.07 88.61 ENST00000756336 lncRNA K562 (Cell line)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 142.33 0.55 0.26 28.35 ENST00000756336 lncRNA K562 (Cell line)