ENCFF001REL

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 686761.00 18.96 1276.66 74.02 SNHG12-223 lncRNA K562 (Cell line)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 2874965.00 79.37 5344.42 98.58 SNHG12-223 lncRNA K562 (Cell line)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 1422.00 0.03 2.64 100.0 SNHG25-206 lncRNA K562 (Cell line)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 4049239.00 97.05 7527.34 97.8 SNHG25-206 lncRNA K562 (Cell line)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 129.00 0.00 0.24 100.0 SNHG25-206 lncRNA K562 (Cell line)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 450.81 0.01 0.84 57.28 SNHG25-206 lncRNA K562 (Cell line)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 934.41 0.02 1.74 72.38 SNHG25-206 lncRNA K562 (Cell line)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 578.07 0.01 1.07 30.27 SNHG25-206 lncRNA K562 (Cell line)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 5031.00 0.12 9.35 97.46 SNHG25-206 lncRNA K562 (Cell line)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 739.00 0.02 1.37 100.0 SNHG25-206 lncRNA K562 (Cell line)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 397.00 34.95 0.74 100.0 ENST00000778783 lncRNA K562 (Cell line)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 97.00 86.61 0.18 95.1 MIR155HG-205 lncRNA K562 (Cell line)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 33658.00 30.60 62.57 100.0 ENST00000785178 lncRNA K562 (Cell line)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 4997.00 20.67 9.29 78.2 ENST00000786284 lncRNA K562 (Cell line)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 5464.00 22.60 10.16 100.0 ENST00000786284 lncRNA K562 (Cell line)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 1393.00 5.76 2.59 57.33 ENST00000786284 lncRNA K562 (Cell line)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 75086.00 80.18 139.58 94.81 ENST00000788343 lncRNA K562 (Cell line)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 9850.89 29.05 18.31 41.13 ENST00000797550 lncRNA K562 (Cell line)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 4239.53 12.50 7.88 17.7 ENST00000797550 lncRNA K562 (Cell line)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 536.00 1.58 1.00 76.46 ENST00000797550 lncRNA K562 (Cell line)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 3306.00 77.24 6.15 94.54 MIR181A1HG-212 lncRNA K562 (Cell line)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 17609.00 64.51 32.73 100.0 C19orf48P-218 lncRNA K562 (Cell line)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 5421.00 19.86 10.08 100.0 C19orf48P-218 lncRNA K562 (Cell line)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 2.00 0.76 0.00 50.0 SNHG18-220 lncRNA K562 (Cell line)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 1514.00 23.02 2.81 100.0 ENST00000817026 lncRNA K562 (Cell line)