ENCFF000JQE
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | IMR-90 (Cell line) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR000CSE |
| Description: | Part of ENCODE experiment ENCSR000CSE. The libraries contained in this experiment come from whole cell extracts from independent growths of cell line, IMR-90. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning. |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000686899.3 | ENST00000686899.3_562_648_+ | 562–648 | 20.51 | 51.28 | 21.98 | 93.24 | SNHG19-202 | lncRNA | IMR-90 (Cell line) |
| ENST00000686899.3 | ENST00000686899.3_562_650_+ | 562–650 | 13.69 | 34.22 | 14.67 | 72.05 | SNHG19-202 | lncRNA | IMR-90 (Cell line) |
| ENST00000722183.1 | ENST00000722183.1_108_192_+ | 108–192 | 1009.00 | 84.86 | 1081.11 | 100.0 | ENST00000722183 | lncRNA | IMR-90 (Cell line) |
| ENST00000747512.1 | ENST00000747512.1_63_156_+ | 63–156 | 3.00 | 100.00 | 3.21 | 100.0 | ENST00000747512 | lncRNA | IMR-90 (Cell line) |
| ENST00000772672.1 | ENST00000772672.1_21_113_+ | 21–113 | 164.00 | 72.89 | 175.72 | 100.0 | ENST00000772672 | lncRNA | IMR-90 (Cell line) |