ENCFF000JMQ
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | placental epithelial cell (Primary cell) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR000CVH |
| Description: | Part of ENCODE experiment ENCSR000CVH. The libraries contained in this experiment come from placental epithelial primary whole cells, HPIEpC isolated from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning. |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000772672.1 | ENST00000772672.1_26_113_+ | 26–113 | 1.00 | 0.00 | 0.04 | 100.0 | ENST00000772672 | lncRNA | placental epithelial cell (Primary cell) |
| ENST00000772672.1 | ENST00000772672.1_21_113_+ | 21–113 | 30876.00 | 90.11 | 1336.92 | 100.0 | ENST00000772672 | lncRNA | placental epithelial cell (Primary cell) |
| ENST00000788343.1 | ENST00000788343.1_17_107_+ | 17–107 | 21.00 | 5.22 | 0.91 | 61.76 | ENST00000788343 | lncRNA | placental epithelial cell (Primary cell) |
| ENST00000823279.1 | ENST00000823279.1_86_169_+ | 86–169 | 3.00 | 0.10 | 0.13 | 100.0 | ENST00000823279 | lncRNA | placental epithelial cell (Primary cell) |
| ENST00000823279.1 | ENST00000823279.1_78_169_+ | 78–169 | 45.00 | 1.51 | 1.95 | 6.36 | ENST00000823279 | lncRNA | placental epithelial cell (Primary cell) |