ENCFF994BMY

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 221049.00 98.33 134.11 100.0 SNORD37-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 73282.00 71.82 44.46 94.47 SNORD59A-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 2973.00 82.91 1.80 100.0 SNORA7B-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 1678.00 78.96 1.02 100.0 SNORD14D-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 214.00 9.43 0.13 100.0 Y_RNA.555-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 8064.00 92.38 4.89 95.53 MIR25-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 2982.00 95.27 1.81 99.6 MIR99B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 25.00 14.45 0.02 50.0 MIR23B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 139.00 80.35 0.08 94.56 MIR23B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 12.00 14.12 0.01 100.0 MIR203A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 3.00 23.08 0.00 50.0 MIR199B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 6.00 46.15 0.00 100.0 MIR199B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 85.00 92.39 0.05 100.0 MIR30B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 11.00 100.00 0.01 100.0 MIR181D-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384857.1 ENST00000384857.1_61_83_+ 61–83 2.00 100.00 0.00 100.0 MIR508-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 6.00 100.00 0.00 100.0 MIR215-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 35.00 3.45 0.02 100.0 MIR181A2-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 90780.00 99.35 55.08 99.77 MIR191-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 58.00 79.45 0.04 89.23 MIR149-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 12.00 85.71 0.01 100.0 MIR194-1-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 303.00 82.34 0.18 85.84 MIR128-2-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 220.00 1.50 0.13 100.0 MIR28-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 13359.00 91.08 8.10 94.23 MIR28-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 172.00 1.17 0.10 96.09 MIR28-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 772.00 71.15 0.47 100.0 MIR183-201 miRNA neural progenitor cell (In vitro differentiated cells)