ENCFF994BMY

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 1.00 100.00 0.00 100.0 MIR145-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 963.00 91.11 0.58 95.35 MIR186-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 181.00 94.27 0.11 100.0 MIR200B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 310.00 91.18 0.19 97.18 MIR181B2-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 1.00 50.00 0.00 100.0 MIR495-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 52.00 77.61 0.03 77.61 MIR10B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 1552.70 32.84 0.94 44.66 MIR130B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 2338.32 49.46 1.42 55.83 MIR130B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 399.00 8.44 0.24 100.0 MIR130B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 3.00 25.00 0.00 100.0 MIR199A1-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 2.00 50.00 0.00 100.0 MIR487B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 2268.63 71.45 1.38 74.33 MIR93-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 689.47 21.72 0.42 27.97 MIR93-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 124.00 80.00 0.08 96.88 MIR532-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 347.00 95.33 0.21 100.0 MIR15B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 4.00 100.00 0.00 100.0 MIR150-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 4.00 66.67 0.00 100.0 MIR542-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 382.00 81.45 0.23 100.0 MIR500A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 2.00 0.43 0.00 100.0 MIR500A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 325.00 79.08 0.20 99.69 MIR30A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 69.00 16.79 0.04 100.0 MIR30A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 8.00 1.95 0.00 100.0 MIR30A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 4.00 0.97 0.00 80.0 MIR30A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 1794.00 87.17 1.09 93.63 MIR27B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 47.00 2.28 0.03 100.0 MIR27B-201 miRNA neural progenitor cell (In vitro differentiated cells)