ENCFF994BMY

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 1342.00 66.90 0.81 72.31 SNORD114-3-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 34.00 1.69 0.02 100.0 SNORD114-3-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 5.00 0.25 0.00 100.0 SNORD114-3-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 449.00 37.51 0.27 100.0 RNA5SP298-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 120.00 78.95 0.07 100.0 SNORD115-38-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 169.00 58.68 0.10 100.0 SNORD115-10-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 93.00 57.41 0.06 100.0 SNORD113-9-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 74.00 55.22 0.04 100.0 SNORD115-20-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 143.00 0.56 0.09 100.0 SNORD38A-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 23124.00 90.81 14.03 100.0 SNORD38A-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 1496.00 5.88 0.91 100.0 SNORD38A-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 377.00 61.90 0.23 93.32 SNORD114-20-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 40.00 0.09 0.02 88.89 7SK.1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 273.00 0.65 0.17 100.0 7SK.1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 6131.00 14.54 3.72 100.0 7SK.1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 4509.00 10.69 2.74 65.3 7SK.1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 5175.00 12.27 3.14 100.0 7SK.1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 3012.00 7.14 1.83 73.93 7SK.1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 4934.00 11.70 2.99 82.29 7SK.1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 27.00 0.06 0.02 100.0 7SK.1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 922.00 2.19 0.56 100.0 7SK.1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 2862.00 76.81 1.74 100.0 SNORD14C-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 141.00 72.31 0.09 100.0 SNORD115-44-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 390.00 45.56 0.24 100.0 RNA5SP77-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 1075.00 38.31 0.65 80.4 SNORD114-22-201 snoRNA neural progenitor cell (In vitro differentiated cells)