ENCFF994BMY

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 1527.91 6.30 0.93 33.48 RNY1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 373.00 1.54 0.23 100.0 RNY1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 609.00 2.51 0.37 100.0 RNY1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 102.00 51.78 0.06 100.0 SNORD115-42-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 2300.00 2.20 1.40 100.0 RNA5SP202-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 387.00 0.37 0.23 100.0 RNA5SP202-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 2441.68 2.33 1.48 29.49 RNA5SP202-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 465.00 0.44 0.28 100.0 RNA5SP202-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 380.00 0.36 0.23 100.0 RNA5SP202-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 18612.81 17.77 11.29 66.56 RNA5SP202-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 458.00 0.44 0.28 100.0 RNA5SP202-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 964.00 0.92 0.58 100.0 RNA5SP202-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 19631.45 18.75 11.91 65.39 RNA5SP202-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 126.00 15.83 0.08 100.0 SNORD114-9-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 213.00 26.76 0.13 100.0 SNORD114-9-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 2471.00 44.82 1.50 100.0 Y_RNA.234-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 1313.00 3.19 0.80 100.0 RNA5S9-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 185.00 81.86 0.11 100.0 SNORD115-23-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 117.00 1.51 0.07 100.0 RNA5SP141-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 31.00 25.00 0.02 100.0 SNORD114-15-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 1252.00 80.36 0.76 100.0 ENST00000364722 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 160.00 61.30 0.10 100.0 SNORD115-15-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 13557.00 94.00 8.23 100.0 SNORD52-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 11087.00 53.53 6.73 66.01 SNORD117-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 5708.00 27.56 3.46 35.0 SNORD117-201 snoRNA neural progenitor cell (In vitro differentiated cells)