ENCFF994BMY

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 63.00 0.11 0.04 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 16.00 0.03 0.01 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 3.00 9.38 0.00 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 520135.00 93.56 315.57 99.76 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 12.00 4.44 0.01 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 10.00 3.70 0.01 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 51.00 8.03 0.03 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 45.00 0.47 0.03 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 4.00 0.00 0.00 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 1887.00 0.34 1.14 85.12 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 211.00 10.52 0.13 95.91 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 18.00 0.90 0.01 7.86 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 540.00 18.44 0.33 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 20664.00 37.26 12.54 93.44 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 2560.00 4.62 1.55 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 156.00 14.26 0.09 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 15.00 3.19 0.01 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 218.00 0.07 0.13 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 117.00 1.73 0.07 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 2665.00 39.31 1.62 88.54 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 92.00 1.36 0.06 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 70.00 1.03 0.04 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 1294.00 19.09 0.79 45.06 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 25.00 0.37 0.02 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 2264.00 16.69 1.37 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA neural progenitor cell (In vitro differentiated cells)