ENCFF994BMY

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 34.00 12.64 0.02 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 22.00 5.23 0.01 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 17.00 2.71 0.01 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 2207.00 28.53 1.34 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 104.00 45.02 0.06 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 246401.00 79.14 149.49 94.21 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 102.00 0.03 0.06 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 4849.00 15.28 2.94 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 281.00 16.20 0.17 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 27.00 2.35 0.02 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 58.00 0.65 0.04 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 3377.00 37.68 2.05 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 985.00 10.99 0.60 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 11578.00 98.85 7.02 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA neural progenitor cell (In vitro differentiated cells)