ENCFF994BMY

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 1087.00 7.25 0.66 100.0 ENST00000756336 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 701.00 4.68 0.43 100.0 ENST00000756336 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 311.00 2.07 0.19 100.0 ENST00000756336 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 76.79 0.51 0.05 1.68 ENST00000756336 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 5059.13 33.75 3.07 94.51 ENST00000756336 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 187.90 1.25 0.11 23.46 ENST00000756336 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 176.93 1.18 0.11 50.26 ENST00000756336 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 783.00 5.22 0.48 100.0 ENST00000756336 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 1185.09 7.90 0.72 87.46 ENST00000756336 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 26.00 17.22 0.02 100.0 ENST00000756452 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 87.00 12.81 0.05 100.0 ENST00000760093 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 5.00 0.74 0.00 100.0 ENST00000760093 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 1201685.00 96.59 729.07 97.97 SNHG14-356 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 10699.00 34.59 6.49 96.34 LINC02806-241 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 3288.00 10.63 1.99 100.0 LINC02806-241 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 57.00 0.18 0.03 100.0 LINC02806-241 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 2418.00 7.82 1.47 48.29 LINC02806-241 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 965.00 95.36 0.59 100.0 EHBP1-AS1-210 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 108.00 7.90 0.07 100.0 ENST00000770398 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 607.00 44.40 0.37 100.0 ENST00000770398 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 7.00 0.51 0.00 100.0 ENST00000770398 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 134.00 5.89 0.08 100.0 ENST00000771298 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 1.00 0.04 0.00 100.0 ENST00000771298 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 605.00 26.58 0.37 77.76 ENST00000771298 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 59.00 2.59 0.04 100.0 ENST00000771298 lncRNA neural progenitor cell (In vitro differentiated cells)