ENCFF994BMY

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 24419.00 81.05 14.82 100.0 ENST00000772672 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 18.00 0.06 0.01 100.0 ENST00000772672 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 78.00 0.26 0.05 100.0 ENST00000772672 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 51.00 28.98 0.03 100.0 ENST00000773843 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 576.00 0.04 0.35 100.0 SNHG12-223 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 431385.00 30.67 261.72 81.47 SNHG12-223 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 968726.00 68.87 587.73 98.43 SNHG12-223 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 1941.00 0.03 1.18 100.0 SNHG25-206 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 6149146.00 95.44 3730.72 95.97 SNHG25-206 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 175.00 0.00 0.11 100.0 SNHG25-206 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 1219.89 0.02 0.74 52.38 SNHG25-206 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 1595.85 0.02 0.97 62.95 SNHG25-206 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 1551.77 0.02 0.94 36.86 SNHG25-206 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 5359.00 0.08 3.25 99.2 SNHG25-206 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 894.00 0.01 0.54 100.0 SNHG25-206 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 1849.00 74.20 1.12 100.0 ENST00000778783 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 34.00 87.18 0.02 89.47 MIR155HG-205 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 3390.00 54.58 2.06 100.0 ENST00000785178 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 131.00 2.80 0.08 87.33 ENST00000786284 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 1737.00 37.10 1.05 100.0 ENST00000786284 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 19.00 0.41 0.01 21.84 ENST00000786284 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 12566.00 76.80 7.62 89.76 ENST00000788343 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 8221.19 26.47 4.99 42.24 ENST00000797550 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 2807.56 9.04 1.70 14.43 ENST00000797550 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 3748.00 12.07 2.27 96.52 ENST00000797550 lncRNA neural progenitor cell (In vitro differentiated cells)