ENCFF994BMY

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 53.00 85.48 0.03 100.0 MIR577-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 52.00 65.00 0.03 83.87 MIR654-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 7485.00 95.56 4.54 96.53 MIR204-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 49.00 89.09 0.03 100.0 MIR152-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 9.00 50.00 0.01 100.0 MIR138-1-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 1073.00 91.95 0.65 100.0 MIR30C1-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 1.00 9.09 0.00 100.0 MIR660-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 48.00 78.69 0.03 96.0 MIR125B1-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 8.00 13.11 0.00 100.0 MIR125B1-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 2.00 28.57 0.00 100.0 MIR493-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 2.00 28.57 0.00 100.0 MIR493-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 39563.47 83.59 24.00 86.13 MIR182-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 11928.40 25.20 7.24 27.12 MIR182-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 250.00 94.34 0.15 95.79 MIR100-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 393.00 88.51 0.24 100.0 MIR301A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 3979.00 66.67 2.41 79.61 MIR130A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 1925.00 32.26 1.17 59.3 MIR130A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 26.00 92.86 0.02 100.0 MIRLET7F2-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 23.00 63.89 0.01 100.0 MIR652-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 5.00 83.33 0.00 100.0 MIR653-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 399.00 65.95 0.24 100.0 MIR140-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 47.00 10.40 0.03 100.0 MIR106B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 35.00 7.74 0.02 48.61 MIR106B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 547810.00 88.31 332.36 99.26 SNORD83A-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 56142.00 9.05 34.06 87.47 SNORD83A-201 snoRNA neural progenitor cell (In vitro differentiated cells)