ENCFF994BMY

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 36278.00 92.20 22.01 100.0 SNORD41-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 10.00 0.99 0.01 66.67 MT-TF-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 37.00 3.65 0.02 100.0 MT-TF-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 189.00 18.62 0.11 73.54 MT-TF-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 1292.00 20.23 0.78 100.0 MT-TV-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 63.00 0.23 0.04 100.0 MT-RNR2-201 Mt rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 542.00 2.01 0.33 100.0 MT-RNR2-201 Mt rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 441.00 1.63 0.27 68.06 MT-RNR2-201 Mt rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 1122.00 4.16 0.68 89.83 MT-RNR2-201 Mt rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 9.00 0.03 0.01 100.0 MT-RNR2-201 Mt rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 64.00 0.24 0.04 100.0 MT-RNR2-201 Mt rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 46.00 0.17 0.03 100.0 MT-RNR2-201 Mt rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 320.00 10.27 0.19 89.14 MT-TI-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 1418.00 45.51 0.86 100.0 MT-TI-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 3584.00 25.81 2.17 79.12 MT-TQ-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 1772.28 12.76 1.08 64.87 MT-TQ-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 448.00 3.23 0.27 100.0 MT-TQ-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 1507.75 10.86 0.91 44.03 MT-TQ-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 213.00 22.10 0.13 100.0 MT-TM-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 162.00 16.80 0.10 62.79 MT-TM-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 73.00 29.55 0.04 100.0 MT-TC-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 439.00 0.39 0.27 100.0 MT-TY-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 528.00 0.46 0.32 67.01 MT-TY-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387409.1 ENST00000387409.1_1_50_+ 1–50 1.00 0.00 0.00 100.0 MT-TY-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 108300.00 95.10 65.71 100.0 MT-TY-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)