ENCFF993BFO

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR099ACU
Description: Part of ENCODE experiment ENCSR099ACU. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 229.00 4.04 2.22 100.0 ENST00000655317 lncRNA body of pancreas (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 2193.00 38.70 21.26 86.82 ENST00000655317 lncRNA body of pancreas (Tissue)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 52.00 0.92 0.50 100.0 ENST00000655317 lncRNA body of pancreas (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 2070.00 3.60 20.07 88.61 LINC01962-202 lncRNA body of pancreas (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 40789.00 70.98 395.48 100.0 LINC01962-202 lncRNA body of pancreas (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 2140.00 3.72 20.75 100.0 LINC01962-202 lncRNA body of pancreas (Tissue)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 185.00 10.42 1.79 100.0 SNHG14-241 lncRNA body of pancreas (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 1615.00 89.57 15.66 100.0 MEG8-228 lncRNA body of pancreas (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 1.00 0.08 0.01 100.0 SNHG14-254 lncRNA body of pancreas (Tissue)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 253.00 16.12 2.45 84.33 SNHG14-261 lncRNA body of pancreas (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 86.00 0.16 0.83 100.0 LIMD1-AS1-204 lncRNA body of pancreas (Tissue)
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 69.00 0.13 0.67 100.0 LIMD1-AS1-204 lncRNA body of pancreas (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 4605.00 8.62 44.65 98.0 LIMD1-AS1-204 lncRNA body of pancreas (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 704.00 49.54 6.83 83.41 MIR99AHG-262 lncRNA body of pancreas (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 375.00 26.39 3.64 100.0 MIR99AHG-262 lncRNA body of pancreas (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 4.00 0.29 0.04 100.0 MIR9-2HG-225 lncRNA body of pancreas (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 853.00 50.09 8.27 100.0 MEG8-233 lncRNA body of pancreas (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 86.00 5.05 0.83 100.0 MEG8-233 lncRNA body of pancreas (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 1.00 0.25 0.01 100.0 SNHG14-278 lncRNA body of pancreas (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 61.00 15.44 0.59 51.69 SNHG14-278 lncRNA body of pancreas (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 257.00 24.98 2.49 100.0 MEG8-234 lncRNA body of pancreas (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 2.00 0.19 0.02 100.0 MEG8-234 lncRNA body of pancreas (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 4058.00 92.61 39.34 100.0 SNHG17-252 lncRNA body of pancreas (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 195.00 3.84 1.89 55.08 SNHG14-288 lncRNA body of pancreas (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 4673.00 91.97 45.31 99.28 SNHG14-288 lncRNA body of pancreas (Tissue)