ENCFF993BFO

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR099ACU
Description: Part of ENCODE experiment ENCSR099ACU. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 127.00 35.77 1.23 100.0 MEG8-240 lncRNA body of pancreas (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 59.00 19.28 0.57 100.0 SNHG14-303 lncRNA body of pancreas (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 1.00 0.47 0.01 100.0 SNHG14-306 lncRNA body of pancreas (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 385.00 49.94 3.73 100.0 MEG8-242 lncRNA body of pancreas (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 0.65 0.40 0.01 1.72 SNHG14-312 lncRNA body of pancreas (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 35.31 21.79 0.34 92.91 SNHG14-312 lncRNA body of pancreas (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 308.00 1.60 2.99 100.0 MEG8-244 lncRNA body of pancreas (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 1261.00 6.55 12.23 100.0 MEG8-244 lncRNA body of pancreas (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 16639.00 86.40 161.33 98.84 MEG8-244 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 773.00 0.79 7.49 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 12324.00 12.53 119.49 99.81 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 155.96 0.16 1.51 85.69 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 358.00 0.36 3.47 83.64 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 10392.00 10.57 100.76 99.72 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 506.00 0.51 4.91 70.18 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 21729.00 22.10 210.68 99.06 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 14041.00 14.28 136.14 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 4806.00 4.89 46.60 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 16.00 0.02 0.16 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 502.00 0.51 4.87 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 28.00 0.03 0.27 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 192.00 0.20 1.86 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 5904.00 6.00 57.24 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 25.00 0.03 0.24 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 1797.00 1.83 17.42 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)