ENCFF993BFO

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR099ACU
Description: Part of ENCODE experiment ENCSR099ACU. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 627.00 20.10 6.08 67.78 MIR23AHG-201 lncRNA body of pancreas (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 912.00 29.23 8.84 97.96 MIR23AHG-201 lncRNA body of pancreas (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6641_+ 6619–6641 93.00 2.98 0.90 49.47 MIR23AHG-201 lncRNA body of pancreas (Tissue)
ENST00000591345.5 ENST00000591345.5_1414_1429_+ 1414–1429 58.00 16.48 0.56 100.0 ODAD3-204 nonsense mediated decay body of pancreas (Tissue)
ENST00000592790.1 ENST00000592790.1_3381_3401_+ 3381–3401 1345.00 11.41 13.04 100.0 VMP1-217 retained intron body of pancreas (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3402_+ 3343–3402 41.00 0.35 0.40 100.0 VMP1-217 retained intron body of pancreas (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3366_+ 3343–3366 5964.00 50.61 57.82 66.71 VMP1-217 retained intron body of pancreas (Tissue)
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 532.00 0.11 5.16 100.0 C19orf48P-203 retained intron body of pancreas (Tissue)
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 371144.40 75.69 3598.48 79.26 C19orf48P-203 retained intron body of pancreas (Tissue)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 97662.97 19.92 946.90 20.13 C19orf48P-203 retained intron body of pancreas (Tissue)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 1117.00 0.23 10.83 89.36 C19orf48P-203 retained intron body of pancreas (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 87.00 0.02 0.84 100.0 C19orf48P-203 retained intron body of pancreas (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 184.00 67.90 1.78 100.0 RPS11-206 retained intron body of pancreas (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 205905.00 73.27 1996.38 74.88 CARMN-209 lncRNA body of pancreas (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 45.00 11.17 0.44 100.0 ENST00000602478 lncRNA body of pancreas (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 2462.00 58.58 23.87 100.0 PPFIA1P1-201 processed pseudogene body of pancreas (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 1044.00 39.50 10.12 100.0 SNORD114-21-201 snoRNA body of pancreas (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 1050.00 39.73 10.18 100.0 SNORD114-21-201 snoRNA body of pancreas (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 1116.00 92.69 10.82 100.0 MIR98-201 miRNA body of pancreas (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 637.00 84.82 6.18 100.0 SNORD113-5-201 snoRNA body of pancreas (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 80.00 100.00 0.78 100.0 MIR15A-201 miRNA body of pancreas (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 5.00 100.00 0.05 100.0 MIR376C-201 miRNA body of pancreas (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 436.00 50.06 4.23 100.0 SNHG21-206 retained intron body of pancreas (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 74.00 49.66 0.72 100.0 SNORD11B-201 snoRNA body of pancreas (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 314.00 12.47 3.04 100.0 SNORD91B-201 snoRNA body of pancreas (Tissue)