ENCFF993BFO

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR099ACU
Description: Part of ENCODE experiment ENCSR099ACU. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 94.00 54.02 0.91 100.0 MIR378C-201 miRNA body of pancreas (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 273.00 75.21 2.65 80.53 MIR142HG-201 lncRNA body of pancreas (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 13.00 3.58 0.13 8.72 MIR142HG-201 lncRNA body of pancreas (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 128.03 0.03 1.24 83.14 RPL23A-208 retained intron body of pancreas (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 71.93 0.02 0.70 58.96 RPL23A-208 retained intron body of pancreas (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 376306.00 92.59 3648.52 95.4 RPL23A-208 retained intron body of pancreas (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 28139.00 6.92 272.83 90.36 RPL23A-208 retained intron body of pancreas (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 488.00 13.41 4.73 90.54 RPL17-211 retained intron body of pancreas (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 724.00 19.89 7.02 64.24 RPL17-211 retained intron body of pancreas (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 1778.00 48.85 17.24 91.13 RPL17-211 retained intron body of pancreas (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 339.00 9.31 3.29 99.71 RPL17-211 retained intron body of pancreas (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 8.00 38.10 0.08 38.1 ENST00000582320 lncRNA body of pancreas (Tissue)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 1610.00 48.54 15.61 100.0 RPL17-214 retained intron body of pancreas (Tissue)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 937.68 28.27 9.09 66.22 RPL17-214 retained intron body of pancreas (Tissue)
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 488.70 14.73 4.74 33.7 RPL17-214 retained intron body of pancreas (Tissue)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 44.00 0.04 0.43 100.0 SNORD43-201 snoRNA body of pancreas (Tissue)
ENST00000583861.1 ENST00000583861.1_27_62_+ 27–62 7.00 0.01 0.07 100.0 SNORD43-201 snoRNA body of pancreas (Tissue)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 114381.00 97.66 1109.00 99.9 SNORD43-201 snoRNA body of pancreas (Tissue)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 39.00 19.12 0.38 100.0 MIR151B-201 miRNA body of pancreas (Tissue)
ENST00000584923.1 ENST00000584923.1_153_216_+ 153–216 526.00 10.48 5.10 100.0 SNORD3A-201 snoRNA body of pancreas (Tissue)
ENST00000585078.1 ENST00000585078.1_1_83_+ 1–83 652.00 47.59 6.32 100.0 SNORD92-201 snoRNA body of pancreas (Tissue)
ENST00000585881.5 ENST00000585881.5_140_162_+ 140–162 1394.00 35.36 13.52 100.0 NSRP1-214 protein coding body of pancreas (Tissue)
ENST00000585881.5 ENST00000585881.5_104_126_+ 104–126 1851.00 46.96 17.95 86.94 NSRP1-214 protein coding body of pancreas (Tissue)
ENST00000587762.2 ENST00000587762.2_6337_6420_+ 6337–6420 219.00 7.02 2.12 100.0 MIR23AHG-201 lncRNA body of pancreas (Tissue)
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 294.00 9.42 2.85 91.88 MIR23AHG-201 lncRNA body of pancreas (Tissue)