ENCFF993BFO

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR099ACU
Description: Part of ENCODE experiment ENCSR099ACU. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 1609.00 44.06 15.60 86.83 RPL4-202 retained intron body of pancreas (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 372.00 10.19 3.61 100.0 RPL4-202 retained intron body of pancreas (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 32.00 0.88 0.31 100.0 RPL4-202 retained intron body of pancreas (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 399.00 10.93 3.87 100.0 RPL4-202 retained intron body of pancreas (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 1021.00 30.29 9.90 100.0 RPL4-207 retained intron body of pancreas (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 488.00 14.48 4.73 100.0 RPL4-207 retained intron body of pancreas (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 165954.00 88.12 1609.03 98.22 ENST00000565336 lncRNA body of pancreas (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 4287.00 2.28 41.57 75.2 ENST00000565336 lncRNA body of pancreas (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 1503.00 1.99 14.57 100.0 RBMX-210 retained intron body of pancreas (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 1210.00 1.60 11.73 100.0 RBMX-210 retained intron body of pancreas (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 36365.00 48.11 352.58 51.16 RBMX-210 retained intron body of pancreas (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 115.00 16.29 1.11 100.0 RPL4-214 retained intron body of pancreas (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 45.00 6.37 0.44 100.0 RPL4-214 retained intron body of pancreas (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 447.00 0.43 4.33 100.0 POLG-DT-202 lncRNA body of pancreas (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 37063.83 35.88 359.36 47.38 POLG-DT-202 lncRNA body of pancreas (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 68243.48 66.06 661.66 87.1 POLG-DT-202 lncRNA body of pancreas (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 832.00 2.88 8.07 100.0 ENST00000570843 lncRNA body of pancreas (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 184.00 53.18 1.78 100.0 MIR497HG-207 lncRNA body of pancreas (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 42074.00 97.15 407.93 97.64 MIR22HG-212 lncRNA body of pancreas (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 28274.00 90.58 274.13 95.3 SNORD53B-201 snoRNA body of pancreas (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 469.00 1.50 4.55 38.07 SNORD53B-201 snoRNA body of pancreas (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 763.00 2.44 7.40 61.93 SNORD53B-201 snoRNA body of pancreas (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 1523.00 81.88 14.77 100.0 ENST00000578036 lncRNA body of pancreas (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 124.00 84.35 1.20 100.0 RPL23A-207 protein coding body of pancreas (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 111.00 82.84 1.08 100.0 MIR744-201 miRNA body of pancreas (Tissue)