ENCFF993BFO

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR099ACU
Description: Part of ENCODE experiment ENCSR099ACU. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 109.00 21.08 1.06 100.0 RPL5-205 retained intron body of pancreas (Tissue)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 231.00 44.68 2.24 100.0 RPL5-205 retained intron body of pancreas (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 79.00 0.30 0.77 100.0 ZBED9-AS1-201 lncRNA body of pancreas (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 506.00 91.17 4.91 100.0 RPS3A-206 retained intron body of pancreas (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 4346.00 97.33 42.14 100.0 COX7C-203 protein coding body of pancreas (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 18232.00 35.03 176.77 99.9 RACK1-229 protein coding body of pancreas (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 2720.38 5.23 26.38 19.28 RACK1-229 protein coding body of pancreas (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 2423.00 4.65 23.49 100.0 RACK1-229 protein coding body of pancreas (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 23267.14 44.70 225.59 91.13 RACK1-229 protein coding body of pancreas (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 62063.00 68.44 601.74 91.65 RACK1-230 retained intron body of pancreas (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 25756.00 28.40 249.72 65.72 RACK1-230 retained intron body of pancreas (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 188.00 4.76 1.82 100.0 RNA5SP486-201 rRNA pseudogene body of pancreas (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 4091.00 89.89 39.66 100.0 SCARNA5-201 scaRNA body of pancreas (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 91.00 0.29 0.88 100.0 RNY4-201 misc RNA body of pancreas (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 33.00 0.11 0.32 100.0 RNY4-201 misc RNA body of pancreas (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 113.00 0.36 1.10 100.0 RNY4-201 misc RNA body of pancreas (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 8200.00 26.32 79.50 97.71 RNY4-201 misc RNA body of pancreas (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 16158.00 51.87 156.66 99.7 RNY4-201 misc RNA body of pancreas (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 607.00 1.95 5.89 100.0 RNY4-201 misc RNA body of pancreas (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 10.00 0.03 0.10 100.0 RNY4-201 misc RNA body of pancreas (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 1388.00 4.46 13.46 47.03 RNY4-201 misc RNA body of pancreas (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 26.00 0.08 0.25 100.0 RNY4-201 misc RNA body of pancreas (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 308.00 0.99 2.99 61.6 RNY4-201 misc RNA body of pancreas (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 16.00 0.05 0.16 100.0 RNY4-201 misc RNA body of pancreas (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 16.00 0.05 0.16 50.0 RNY4-201 misc RNA body of pancreas (Tissue)