ENCFF993BFO

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR099ACU
Description: Part of ENCODE experiment ENCSR099ACU. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 67063.00 34.25 650.22 96.4 RPL21-209 retained intron body of pancreas (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 4.00 0.00 0.04 100.0 RPL21-209 retained intron body of pancreas (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 4187.00 2.14 40.60 100.0 RPL21-209 retained intron body of pancreas (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 456.00 0.23 4.42 100.0 RPL21-209 retained intron body of pancreas (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 121699.00 62.16 1179.95 99.73 RPL21-209 retained intron body of pancreas (Tissue)
ENST00000488946.1 ENST00000488946.1_804_886_+ 804–886 686.00 1.98 6.65 93.59 RPL13A-212 retained intron body of pancreas (Tissue)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 382.00 1.10 3.70 100.0 RPL13A-212 retained intron body of pancreas (Tissue)
ENST00000488946.1 ENST00000488946.1_197_235_+ 197–235 137.00 0.39 1.33 100.0 RPL13A-212 retained intron body of pancreas (Tissue)
ENST00000488946.1 ENST00000488946.1_155_235_+ 155–235 22546.00 64.93 218.60 99.76 RPL13A-212 retained intron body of pancreas (Tissue)
ENST00000489392.1 ENST00000489392.1_151_188_+ 151–188 1178.00 25.19 11.42 100.0 RPL7A-207 protein coding CDS not defined body of pancreas (Tissue)
ENST00000489392.1 ENST00000489392.1_116_191_+ 116–191 468.00 10.01 4.54 86.35 RPL7A-207 protein coding CDS not defined body of pancreas (Tissue)
ENST00000489392.1 ENST00000489392.1_151_191_+ 151–191 171.00 3.66 1.66 100.0 RPL7A-207 protein coding CDS not defined body of pancreas (Tissue)
ENST00000490232.3 ENST00000490232.3_229_300_+ 229–300 62.00 1.36 0.60 6.03 RN7SL2-201 misc RNA body of pancreas (Tissue)
ENST00000493449.5 ENST00000493449.5_96_109_+ 96–109 420.00 74.73 4.07 100.0 RGS11-208 retained intron body of pancreas (Tissue)
ENST00000494697.5 ENST00000494697.5_274_348_+ 274–348 6883.00 51.21 66.74 61.05 NOP56-217 protein coding CDS not defined body of pancreas (Tissue)
ENST00000494697.5 ENST00000494697.5_306_348_+ 306–348 1327.00 9.87 12.87 91.52 NOP56-217 protein coding CDS not defined body of pancreas (Tissue)
ENST00000496055.5 ENST00000496055.5_471_552_+ 471–552 12095.00 68.33 117.27 95.38 RABGGTB-213 protein coding CDS not defined body of pancreas (Tissue)
ENST00000496055.5 ENST00000496055.5_471_515_+ 471–515 177.00 1.00 1.72 53.64 RABGGTB-213 protein coding CDS not defined body of pancreas (Tissue)
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 495.00 2.80 4.80 100.0 RABGGTB-213 protein coding CDS not defined body of pancreas (Tissue)
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 966.00 5.46 9.37 100.0 RABGGTB-213 protein coding CDS not defined body of pancreas (Tissue)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 153.00 0.86 1.48 46.36 RABGGTB-213 protein coding CDS not defined body of pancreas (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2126_+ 2059–2126 102.00 0.58 0.99 57.3 RABGGTB-213 protein coding CDS not defined body of pancreas (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2091_+ 2059–2091 137.00 0.77 1.33 100.0 RABGGTB-213 protein coding CDS not defined body of pancreas (Tissue)
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 189.00 19.52 1.83 100.0 GNL3-211 retained intron body of pancreas (Tissue)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 652.00 67.36 6.32 100.0 GNL3-211 retained intron body of pancreas (Tissue)